Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 LINC01311-201ENST00000565162 1445 ntBASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 AC024563.2-201ENST00000603282 481 ntBASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 AC024243.1-201ENST00000609234 778 ntBASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC01561Q8N1V8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC01561Q8N1V8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
LINC01561Q8N1V8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
LINC01561Q8N1V8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LINC01561Q8N1V8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 AC068418.2-201ENST00000577309 3703 ntBASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 MIR718-201ENST00000390190 70 ntBASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 AC009947.2-201ENST00000444014 672 ntBASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 AC009154.2-201ENST00000621177 724 ntBASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms