Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.01■□□□□ 0.15
RP1L1Q8IWN7 AC190387.1-201ENST00000551683 408 ntBASIC16.01■□□□□ 0.15
RP1L1Q8IWN7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 TSEN15P1-201ENST00000423257 515 ntBASIC16■□□□□ 0.15
RP1L1Q8IWN7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16■□□□□ 0.15
RP1L1Q8IWN7 AC027612.4-201ENST00000605371 583 ntBASIC16■□□□□ 0.15
RP1L1Q8IWN7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RP1L1Q8IWN7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 AC108073.2-201ENST00000464002 357 ntBASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 AC079776.2-201ENST00000641154 1609 ntBASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.99■□□□□ 0.15
RP1L1Q8IWN7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 AC006504.4-201ENST00000592118 1568 ntBASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 AC116562.4-201ENST00000641316 2276 ntBASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 AP002472.1-201ENST00000577490 586 ntBASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.98■□□□□ 0.15
RP1L1Q8IWN7 AC132938.6-201ENST00000623828 1655 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms