Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AC016734.2-201ENST00000624325 1377 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 MIR564-202ENST00000385049 94 ntBASIC16.61■□□□□ 0.25
CCDC71Q8IV32 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 AC079602.3-201ENST00000623931 403 ntBASIC16.61■□□□□ 0.25
CCDC71Q8IV32 AC112497.1-201ENST00000624824 639 ntBASIC16.61■□□□□ 0.25
CCDC71Q8IV32 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.61■□□□□ 0.25
CCDC71Q8IV32 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71Q8IV32 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 AC093010.1-201ENST00000473625 1624 ntBASIC16.6■□□□□ 0.25
CCDC71Q8IV32 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC71Q8IV32 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71Q8IV32 AC090340.1-201ENST00000620778 4980 ntBASIC16.59■□□□□ 0.25
CCDC71Q8IV32 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms