Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13DQ5THJ4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 AC135776.1-201ENST00000319817 2481 ntBASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 AP000997.3-201ENST00000623333 2250 ntBASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 AC009336.1-201ENST00000608941 1553 ntBASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC11.77□□□□□ -0.52
VPS13DQ5THJ4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 PMS2P4-201ENST00000412466 1052 ntBASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 MIR943-201ENST00000401286 94 ntBASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 KRT8P48-201ENST00000515599 1220 ntBASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 LINC01225-203ENST00000563550 1244 ntBASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 FAM58CP-201ENST00000435741 640 ntBASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.77□□□□□ -0.53
VPS13DQ5THJ4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
VPS13DQ5THJ4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VPS13DQ5THJ4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13DQ5THJ4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VPS13DQ5THJ4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC11.76□□□□□ -0.53
VPS13DQ5THJ4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13DQ5THJ4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.76□□□□□ -0.53
VPS13DQ5THJ4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms