Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 AC006116.8-202ENST00000587620 1550 ntBASIC21.13■□□□□ 0.97
PDS5AQ29RF7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 IGHV3-65-201ENST00000523210 341 ntBASIC21.12■□□□□ 0.97
PDS5AQ29RF7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDS5AQ29RF7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 AC006538.3-201ENST00000612495 578 ntBASIC21.11■□□□□ 0.97
PDS5AQ29RF7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDS5AQ29RF7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 LINC00982-205ENST00000420957 435 ntBASIC21.1■□□□□ 0.97
PDS5AQ29RF7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 RPS15P9-201ENST00000494093 319 ntBASIC21.1■□□□□ 0.97
PDS5AQ29RF7 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 LINC00304-203ENST00000565008 1864 ntBASIC21.1■□□□□ 0.97
PDS5AQ29RF7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 AC097637.2-201ENST00000624096 1997 ntBASIC21.1■□□□□ 0.97
PDS5AQ29RF7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PDS5AQ29RF7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDS5AQ29RF7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms