Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA3P83110 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.31■□□□□ 0.84
HTRA3P83110 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA3P83110 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.31■□□□□ 0.84
HTRA3P83110 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA3P83110 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA3P83110 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.31■□□□□ 0.84
HTRA3P83110 AC141586.3-201ENST00000562166 1838 ntBASIC20.31■□□□□ 0.84
HTRA3P83110 AC005082.1-201ENST00000413042 2259 ntBASIC20.3■□□□□ 0.84
HTRA3P83110 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA3P83110 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA3P83110 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA3P83110 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HTRA3P83110 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA3P83110 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA3P83110 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA3P83110 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA3P83110 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA3P83110 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 AL138828.2-201ENST00000615812 383 ntBASIC20.3■□□□□ 0.84
HTRA3P83110 MIR6869-201ENST00000619434 62 ntBASIC20.3■□□□□ 0.84
HTRA3P83110 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA3P83110 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA3P83110 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.3■□□□□ 0.84
HTRA3P83110 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA3P83110 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA3P83110 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
HTRA3P83110 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
HTRA3P83110 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HTRA3P83110 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.29■□□□□ 0.84
HTRA3P83110 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.29■□□□□ 0.84
HTRA3P83110 AC009407.1-201ENST00000568958 598 ntBASIC20.29■□□□□ 0.84
HTRA3P83110 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HTRA3P83110 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HTRA3P83110 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.29■□□□□ 0.84
HTRA3P83110 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.29■□□□□ 0.84
HTRA3P83110 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HTRA3P83110 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA3P83110 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.29■□□□□ 0.84
HTRA3P83110 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 AL499627.1-201ENST00000569373 2188 ntBASIC20.28■□□□□ 0.84
HTRA3P83110 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HTRA3P83110 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.28■□□□□ 0.84
HTRA3P83110 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.28■□□□□ 0.84
HTRA3P83110 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
HTRA3P83110 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.28■□□□□ 0.84
HTRA3P83110 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.28■□□□□ 0.84
HTRA3P83110 RN7SL190P-201ENST00000582519 257 ntBASIC20.28■□□□□ 0.84
HTRA3P83110 AC008494.3-201ENST00000606615 944 ntBASIC20.28■□□□□ 0.84
HTRA3P83110 AC244093.1-201ENST00000610837 814 ntBASIC20.28■□□□□ 0.84
HTRA3P83110 AC133552.6-201ENST00000613406 534 ntBASIC20.28■□□□□ 0.84
HTRA3P83110 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA3P83110 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HTRA3P83110 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA3P83110 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
HTRA3P83110 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA3P83110 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.27■□□□□ 0.84
HTRA3P83110 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.27■□□□□ 0.84
HTRA3P83110 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA3P83110 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA3P83110 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA3P83110 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA3P83110 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms