Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
IRX3P78415 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 AC007613.1-201ENST00000572811 2597 ntBASIC20.55■□□□□ 0.88
IRX3P78415 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.55■□□□□ 0.88
IRX3P78415 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.55■□□□□ 0.88
IRX3P78415 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
IRX3P78415 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
IRX3P78415 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
IRX3P78415 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
IRX3P78415 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.55■□□□□ 0.88
IRX3P78415 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.55■□□□□ 0.88
IRX3P78415 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.55■□□□□ 0.88
IRX3P78415 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.55■□□□□ 0.88
IRX3P78415 AC108751.1-201ENST00000490852 363 ntBASIC20.55■□□□□ 0.88
IRX3P78415 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.55■□□□□ 0.88
IRX3P78415 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.55■□□□□ 0.88
IRX3P78415 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
IRX3P78415 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.55■□□□□ 0.88
IRX3P78415 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.55■□□□□ 0.88
IRX3P78415 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IRX3P78415 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.54■□□□□ 0.88
IRX3P78415 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
IRX3P78415 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
IRX3P78415 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
IRX3P78415 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 SPDYE21P-201ENST00000413323 827 ntBASIC20.54■□□□□ 0.88
IRX3P78415 AC103564.2-201ENST00000432853 1299 ntBASIC20.54■□□□□ 0.88
IRX3P78415 PRYP5-201ENST00000451909 266 ntBASIC20.54■□□□□ 0.88
IRX3P78415 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 AC136632.2-201ENST00000512891 861 ntBASIC20.54■□□□□ 0.88
IRX3P78415 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.54■□□□□ 0.88
IRX3P78415 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.54■□□□□ 0.88
IRX3P78415 AC064836.3-201ENST00000607928 673 ntBASIC20.54■□□□□ 0.88
IRX3P78415 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
IRX3P78415 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
IRX3P78415 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.54■□□□□ 0.88
IRX3P78415 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IRX3P78415 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.54■□□□□ 0.88
IRX3P78415 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 SIGLEC16-201ENST00000599858 1437 ntBASIC20.53■□□□□ 0.88
IRX3P78415 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.53■□□□□ 0.88
IRX3P78415 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX3P78415 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX3P78415 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX3P78415 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX3P78415 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IRX3P78415 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 PMS2P2-201ENST00000425039 1128 ntBASIC20.53■□□□□ 0.88
IRX3P78415 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.53■□□□□ 0.88
IRX3P78415 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.53■□□□□ 0.88
IRX3P78415 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 AC073592.5-201ENST00000624854 528 ntBASIC20.53■□□□□ 0.88
IRX3P78415 AC134684.3-201ENST00000641758 218 ntBASIC20.53■□□□□ 0.88
IRX3P78415 KRT8P47-201ENST00000604727 1398 ntBASIC20.53■□□□□ 0.88
IRX3P78415 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.53■□□□□ 0.88
IRX3P78415 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms