Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 KRT18P13-201ENST00000400056 1290 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN2P57739 AC092865.5-201ENST00000545435 363 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 AC109462.3-201ENST00000573934 613 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN2P57739 Z83851.2-201ENST00000609564 659 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 AC116407.2-201ENST00000613639 860 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN2P57739 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.44■□□□□ 0.38
CLDN2P57739 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CLDN2P57739 SIGLEC16-201ENST00000599858 1437 ntBASIC17.44■□□□□ 0.38
CLDN2P57739 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLDN2P57739 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN2P57739 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLDN2P57739 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.44■□□□□ 0.38
CLDN2P57739 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN2P57739 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN2P57739 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 AL020989.1-201ENST00000422979 469 ntBASIC17.43■□□□□ 0.38
CLDN2P57739 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN2P57739 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLDN2P57739 UNC93B6-202ENST00000528242 690 ntBASIC17.43■□□□□ 0.38
CLDN2P57739 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN2P57739 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN2P57739 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.43■□□□□ 0.38
CLDN2P57739 AC140113.2-201ENST00000604370 208 ntBASIC17.43■□□□□ 0.38
CLDN2P57739 AC019129.2-201ENST00000609837 1235 ntBASIC17.43■□□□□ 0.38
CLDN2P57739 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.43■□□□□ 0.38
CLDN2P57739 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CLDN2P57739 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.43■□□□□ 0.38
CLDN2P57739 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.43■□□□□ 0.38
CLDN2P57739 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLDN2P57739 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.42■□□□□ 0.38
CLDN2P57739 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.42■□□□□ 0.38
CLDN2P57739 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN2P57739 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 MED15P5-201ENST00000423150 992 ntBASIC17.42■□□□□ 0.38
CLDN2P57739 PRYP5-201ENST00000451909 266 ntBASIC17.42■□□□□ 0.38
CLDN2P57739 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 AL356488.2-201ENST00000602755 427 ntBASIC17.42■□□□□ 0.38
CLDN2P57739 AC027601.4-201ENST00000611259 610 ntBASIC17.42■□□□□ 0.38
CLDN2P57739 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.42■□□□□ 0.38
CLDN2P57739 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN2P57739 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLDN2P57739 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLDN2P57739 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN2P57739 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN2P57739 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN2P57739 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms