Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHB3P54753 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 STK19B-204ENST00000512515 211 ntBASIC18.44■□□□□ 0.54
EPHB3P54753 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.44■□□□□ 0.54
EPHB3P54753 AC004706.3-202ENST00000621574 984 ntBASIC18.44■□□□□ 0.54
EPHB3P54753 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
EPHB3P54753 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
EPHB3P54753 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 AP000997.3-201ENST00000623333 2250 ntBASIC18.44■□□□□ 0.54
EPHB3P54753 AC148477.5-201ENST00000625164 1645 ntBASIC18.44■□□□□ 0.54
EPHB3P54753 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB3P54753 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB3P54753 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
EPHB3P54753 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
EPHB3P54753 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHB3P54753 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
EPHB3P54753 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB3P54753 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHB3P54753 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB3P54753 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
EPHB3P54753 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
EPHB3P54753 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
EPHB3P54753 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.42■□□□□ 0.54
EPHB3P54753 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.42■□□□□ 0.54
EPHB3P54753 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 AC007967.2-201ENST00000432613 625 ntBASIC18.42■□□□□ 0.54
EPHB3P54753 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.42■□□□□ 0.54
EPHB3P54753 AC108751.1-201ENST00000490852 363 ntBASIC18.42■□□□□ 0.54
EPHB3P54753 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.42■□□□□ 0.54
EPHB3P54753 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.42■□□□□ 0.54
EPHB3P54753 STK25P1-201ENST00000585406 838 ntBASIC18.42■□□□□ 0.54
EPHB3P54753 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
EPHB3P54753 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
EPHB3P54753 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.42■□□□□ 0.54
EPHB3P54753 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB3P54753 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
EPHB3P54753 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
EPHB3P54753 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.42■□□□□ 0.54
EPHB3P54753 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
EPHB3P54753 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
EPHB3P54753 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
EPHB3P54753 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHB3P54753 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHB3P54753 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.41■□□□□ 0.54
EPHB3P54753 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHB3P54753 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
EPHB3P54753 FLJ13224-201ENST00000313737 1514 ntBASIC18.41■□□□□ 0.54
EPHB3P54753 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
EPHB3P54753 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.41■□□□□ 0.54
EPHB3P54753 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms