Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CCNFP41002 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCNFP41002 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.83■□□□□ 0.44
CCNFP41002 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CCNFP41002 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CCNFP41002 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.83■□□□□ 0.44
CCNFP41002 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.83■□□□□ 0.44
CCNFP41002 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCNFP41002 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.82■□□□□ 0.44
CCNFP41002 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.82■□□□□ 0.44
CCNFP41002 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.82■□□□□ 0.44
CCNFP41002 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCNFP41002 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.82■□□□□ 0.44
CCNFP41002 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCNFP41002 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.82■□□□□ 0.44
CCNFP41002 AL049597.2-201ENST00000565575 961 ntBASIC17.82■□□□□ 0.44
CCNFP41002 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.82■□□□□ 0.44
CCNFP41002 LINC01451-201ENST00000623792 534 ntBASIC17.82■□□□□ 0.44
CCNFP41002 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCNFP41002 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.82■□□□□ 0.44
CCNFP41002 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCNFP41002 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 AL391005.1-201ENST00000623953 2435 ntBASIC17.81■□□□□ 0.44
CCNFP41002 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCNFP41002 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.81■□□□□ 0.44
CCNFP41002 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCNFP41002 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.81■□□□□ 0.44
CCNFP41002 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.81■□□□□ 0.44
CCNFP41002 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.81■□□□□ 0.44
CCNFP41002 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.81■□□□□ 0.44
CCNFP41002 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.81■□□□□ 0.44
CCNFP41002 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 AL391807.1-203ENST00000604392 2365 ntBASIC17.81■□□□□ 0.44
CCNFP41002 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCNFP41002 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCNFP41002 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.81■□□□□ 0.44
CCNFP41002 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCNFP41002 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCNFP41002 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNFP41002 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNFP41002 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCNFP41002 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
CCNFP41002 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNFP41002 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNFP41002 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.8■□□□□ 0.44
CCNFP41002 HLA-F-220ENST00000434407 884 ntBASIC17.8■□□□□ 0.44
CCNFP41002 AC112907.2-201ENST00000448639 330 ntBASIC17.8■□□□□ 0.44
CCNFP41002 KRT18P38-201ENST00000449496 1282 ntBASIC17.8■□□□□ 0.44
CCNFP41002 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.8■□□□□ 0.44
CCNFP41002 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNFP41002 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNFP41002 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.8■□□□□ 0.44
CCNFP41002 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCNFP41002 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCNFP41002 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.8■□□□□ 0.44
CCNFP41002 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms