Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CHRNA3P32297 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CHRNA3P32297 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.68■□□□□ 0.58
CHRNA3P32297 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 AC022898.2-201ENST00000616822 1312 ntBASIC18.68■□□□□ 0.58
CHRNA3P32297 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHRNA3P32297 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHRNA3P32297 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
CHRNA3P32297 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.67■□□□□ 0.58
CHRNA3P32297 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHRNA3P32297 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRNA3P32297 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CHRNA3P32297 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CHRNA3P32297 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.67■□□□□ 0.58
CHRNA3P32297 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.67■□□□□ 0.58
CHRNA3P32297 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.67■□□□□ 0.58
CHRNA3P32297 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 AC022211.2-201ENST00000585075 2527 ntBASIC18.67■□□□□ 0.58
CHRNA3P32297 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHRNA3P32297 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 CROCCP2-202ENST00000412962 2773 ntBASIC18.66■□□□□ 0.58
CHRNA3P32297 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CHRNA3P32297 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA3P32297 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA3P32297 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA3P32297 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA3P32297 PVRIG2P-201ENST00000435460 978 ntBASIC18.66■□□□□ 0.58
CHRNA3P32297 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.66■□□□□ 0.58
CHRNA3P32297 AC093458.2-201ENST00000623150 629 ntBASIC18.66■□□□□ 0.58
CHRNA3P32297 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 AL121761.2-201ENST00000598007 1648 ntBASIC18.66■□□□□ 0.58
CHRNA3P32297 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA3P32297 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.66■□□□□ 0.58
CHRNA3P32297 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.66■□□□□ 0.58
CHRNA3P32297 AC106820.2-201ENST00000563775 3264 ntBASIC18.66■□□□□ 0.58
CHRNA3P32297 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CHRNA3P32297 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHRNA3P32297 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA3P32297 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA3P32297 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA3P32297 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 LINC00304-203ENST00000565008 1864 ntBASIC18.65■□□□□ 0.58
CHRNA3P32297 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHRNA3P32297 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 MIR662-201ENST00000384847 95 ntBASIC18.65■□□□□ 0.58
CHRNA3P32297 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA3P32297 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 AC069148.1-201ENST00000608741 768 ntBASIC18.65■□□□□ 0.58
CHRNA3P32297 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.65■□□□□ 0.58
CHRNA3P32297 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.65■□□□□ 0.58
CHRNA3P32297 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHRNA3P32297 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms