Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH3P22223 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH3P22223 FOSL1P1-201ENST00000511041 816 ntBASIC17.36■□□□□ 0.37
CDH3P22223 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH3P22223 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH3P22223 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH3P22223 AL121772.3-201ENST00000610840 674 ntBASIC17.36■□□□□ 0.37
CDH3P22223 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH3P22223 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH3P22223 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH3P22223 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDH3P22223 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH3P22223 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 SIRPAP1-201ENST00000448467 1770 ntBASIC17.35■□□□□ 0.37
CDH3P22223 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH3P22223 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CDH3P22223 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CDH3P22223 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH3P22223 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDH3P22223 KRT18P65-201ENST00000439811 1286 ntBASIC17.35■□□□□ 0.37
CDH3P22223 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 AC068472.1-201ENST00000474589 881 ntBASIC17.35■□□□□ 0.37
CDH3P22223 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH3P22223 AC111152.3-201ENST00000569699 673 ntBASIC17.35■□□□□ 0.37
CDH3P22223 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 NSUN5P1-202ENST00000421140 1535 ntBASIC17.35■□□□□ 0.37
CDH3P22223 NSUN5P2-203ENST00000457352 1529 ntBASIC17.35■□□□□ 0.37
CDH3P22223 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH3P22223 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CDH3P22223 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH3P22223 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH3P22223 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH3P22223 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDH3P22223 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH3P22223 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 AL845331.1-201ENST00000424978 1190 ntBASIC17.34■□□□□ 0.37
CDH3P22223 IGHV3-47-201ENST00000425060 335 ntBASIC17.34■□□□□ 0.37
CDH3P22223 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CDH3P22223 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 AC091607.1-201ENST00000490318 1060 ntBASIC17.34■□□□□ 0.37
CDH3P22223 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH3P22223 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH3P22223 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH3P22223 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH3P22223 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH3P22223 AP005901.3-202ENST00000581653 237 ntBASIC17.34■□□□□ 0.37
CDH3P22223 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 LINC01711-201ENST00000598340 967 ntBASIC17.34■□□□□ 0.37
CDH3P22223 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH3P22223 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.34■□□□□ 0.37
CDH3P22223 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDH3P22223 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH3P22223 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CDH3P22223 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms