Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.43■□□□□ 0.22
PRKCAP17252 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PRKCAP17252 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.43■□□□□ 0.22
PRKCAP17252 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 AC138028.4-201ENST00000564984 1845 ntBASIC16.42■□□□□ 0.22
PRKCAP17252 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PRKCAP17252 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PRKCAP17252 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PRKCAP17252 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRKCAP17252 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 FLJ13224-201ENST00000313737 1514 ntBASIC16.42■□□□□ 0.22
PRKCAP17252 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.42■□□□□ 0.22
PRKCAP17252 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 MIR1224-201ENST00000408193 85 ntBASIC16.42■□□□□ 0.22
PRKCAP17252 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PRKCAP17252 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.42■□□□□ 0.22
PRKCAP17252 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.42■□□□□ 0.22
PRKCAP17252 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 AC010331.1-201ENST00000611423 582 ntBASIC16.42■□□□□ 0.22
PRKCAP17252 AC004263.2-201ENST00000617183 678 ntBASIC16.42■□□□□ 0.22
PRKCAP17252 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRKCAP17252 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRKCAP17252 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRKCAP17252 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.42■□□□□ 0.22
PRKCAP17252 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 AC008764.6-201ENST00000595909 2069 ntBASIC16.41■□□□□ 0.22
PRKCAP17252 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRKCAP17252 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRKCAP17252 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PRKCAP17252 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.41■□□□□ 0.22
PRKCAP17252 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.41■□□□□ 0.22
PRKCAP17252 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 KRT18P35-201ENST00000510488 1269 ntBASIC16.41■□□□□ 0.22
PRKCAP17252 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.41■□□□□ 0.22
PRKCAP17252 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.41■□□□□ 0.22
PRKCAP17252 RNF126P1-202ENST00000569893 925 ntBASIC16.41■□□□□ 0.22
PRKCAP17252 AC005332.3-201ENST00000589904 676 ntBASIC16.41■□□□□ 0.22
PRKCAP17252 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PRKCAP17252 GPR32P1-201ENST00000601788 811 ntBASIC16.41■□□□□ 0.22
PRKCAP17252 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.41■□□□□ 0.22
PRKCAP17252 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.41■□□□□ 0.22
PRKCAP17252 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.41■□□□□ 0.22
PRKCAP17252 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.41■□□□□ 0.22
PRKCAP17252 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRKCAP17252 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRKCAP17252 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.4■□□□□ 0.22
PRKCAP17252 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKCAP17252 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms