Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC079781.3-201ENST00000449110 356 ntBASIC20.8■□□□□ 0.92
TOP1P11387 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 AC104692.2-201ENST00000603054 253 ntBASIC20.8■□□□□ 0.92
TOP1P11387 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP1P11387 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP1P11387 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP1P11387 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP1P11387 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.79■□□□□ 0.92
TOP1P11387 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.79■□□□□ 0.92
TOP1P11387 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.79■□□□□ 0.92
TOP1P11387 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.79■□□□□ 0.92
TOP1P11387 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TOP1P11387 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
TOP1P11387 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 AL121912.1-201ENST00000603683 238 ntBASIC20.79■□□□□ 0.92
TOP1P11387 AC116407.2-201ENST00000613639 860 ntBASIC20.79■□□□□ 0.92
TOP1P11387 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TOP1P11387 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
TOP1P11387 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOP1P11387 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.78■□□□□ 0.92
TOP1P11387 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TOP1P11387 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.78■□□□□ 0.92
TOP1P11387 AC138028.4-201ENST00000564984 1845 ntBASIC20.78■□□□□ 0.92
TOP1P11387 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
TOP1P11387 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TOP1P11387 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.78■□□□□ 0.92
TOP1P11387 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 AC067852.2-201ENST00000590513 2313 ntBASIC20.78■□□□□ 0.92
TOP1P11387 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.78■□□□□ 0.92
TOP1P11387 KRT18P55-202ENST00000578578 1546 ntBASIC20.78■□□□□ 0.92
TOP1P11387 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TOP1P11387 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TOP1P11387 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.77■□□□□ 0.92
TOP1P11387 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TOP1P11387 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.77■□□□□ 0.92
TOP1P11387 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 COX5BP2-201ENST00000392354 334 ntBASIC20.77■□□□□ 0.92
TOP1P11387 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.77■□□□□ 0.92
TOP1P11387 AC122714.2-201ENST00000502787 707 ntBASIC20.77■□□□□ 0.92
TOP1P11387 AC106795.1-205ENST00000512851 1056 ntBASIC20.77■□□□□ 0.92
TOP1P11387 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.77■□□□□ 0.92
TOP1P11387 AL160237.2-201ENST00000556165 472 ntBASIC20.77■□□□□ 0.92
TOP1P11387 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.77■□□□□ 0.92
TOP1P11387 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.77■□□□□ 0.92
TOP1P11387 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.77■□□□□ 0.92
TOP1P11387 AP001269.4-201ENST00000609611 512 ntBASIC20.77■□□□□ 0.92
TOP1P11387 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.77■□□□□ 0.92
TOP1P11387 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TOP1P11387 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.77■□□□□ 0.92
TOP1P11387 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOP1P11387 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms