Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.05□□□□□ -0.16
PF4V1P10720 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PF4V1P10720 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PF4V1P10720 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PF4V1P10720 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PF4V1P10720 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PF4V1P10720 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PF4V1P10720 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 MTCL1P1-201ENST00000446207 792 ntBASIC14.04□□□□□ -0.16
PF4V1P10720 KRT16P4-201ENST00000453883 522 ntBASIC14.04□□□□□ -0.16
PF4V1P10720 AC009078.2-202ENST00000463353 338 ntBASIC14.04□□□□□ -0.16
PF4V1P10720 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.04□□□□□ -0.16
PF4V1P10720 AC096582.2-201ENST00000510860 516 ntBASIC14.04□□□□□ -0.16
PF4V1P10720 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.04□□□□□ -0.16
PF4V1P10720 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.04□□□□□ -0.16
PF4V1P10720 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.04□□□□□ -0.16
PF4V1P10720 AL121912.1-201ENST00000603683 238 ntBASIC14.04□□□□□ -0.16
PF4V1P10720 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.04□□□□□ -0.16
PF4V1P10720 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
PF4V1P10720 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.04□□□□□ -0.16
PF4V1P10720 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.04□□□□□ -0.16
PF4V1P10720 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PF4V1P10720 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PF4V1P10720 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 IGHV3-47-201ENST00000425060 335 ntBASIC14.03□□□□□ -0.16
PF4V1P10720 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 SAPCD2P3-201ENST00000455031 850 ntBASIC14.03□□□□□ -0.16
PF4V1P10720 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
PF4V1P10720 RN7SL606P-201ENST00000472779 293 ntBASIC14.03□□□□□ -0.16
PF4V1P10720 AC068472.1-201ENST00000474589 881 ntBASIC14.03□□□□□ -0.16
PF4V1P10720 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PF4V1P10720 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.03□□□□□ -0.16
PF4V1P10720 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.03□□□□□ -0.16
PF4V1P10720 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 AC064862.7-201ENST00000604520 867 ntBASIC14.03□□□□□ -0.16
PF4V1P10720 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms