Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 KRT8P9-201ENST00000558927 1449 ntBASIC17.18■□□□□ 0.34
LINGO3P0C6S8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 AC006116.8-202ENST00000587620 1550 ntBASIC17.18■□□□□ 0.34
LINGO3P0C6S8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LINGO3P0C6S8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 FLJ13224-201ENST00000313737 1514 ntBASIC17.17■□□□□ 0.34
LINGO3P0C6S8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 AC068587.9-201ENST00000641814 219 ntBASIC17.17■□□□□ 0.34
LINGO3P0C6S8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.17■□□□□ 0.34
LINGO3P0C6S8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
LINGO3P0C6S8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 CYP2D8P-201ENST00000433633 1490 ntBASIC17.16■□□□□ 0.34
LINGO3P0C6S8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LINGO3P0C6S8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 SLC25A1P2-201ENST00000430693 912 ntBASIC17.15■□□□□ 0.34
LINGO3P0C6S8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.15■□□□□ 0.34
LINGO3P0C6S8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 AL023803.3-201ENST00000615559 522 ntBASIC17.15■□□□□ 0.34
LINGO3P0C6S8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 RCC2P3-201ENST00000418112 1537 ntBASIC17.15■□□□□ 0.34
LINGO3P0C6S8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms