Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TCRAP04437 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRAP04437 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRAP04437 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRAP04437 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRAP04437 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRAP04437 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRAP04437 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRAP04437 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TCRAP04437 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRAP04437 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TCRAP04437 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.49□□□□□ -0.25
TCRAP04437 AC016396.2-201ENST00000562575 1417 ntBASIC13.49□□□□□ -0.25
TCRAP04437 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 DDX43P3-201ENST00000441064 443 ntBASIC13.49□□□□□ -0.25
TCRAP04437 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 TSPY17P-201ENST00000450329 467 ntBASIC13.49□□□□□ -0.25
TCRAP04437 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.49□□□□□ -0.25
TCRAP04437 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.49□□□□□ -0.25
TCRAP04437 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.49□□□□□ -0.25
TCRAP04437 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.49□□□□□ -0.25
TCRAP04437 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
TCRAP04437 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.49□□□□□ -0.25
TCRAP04437 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.49□□□□□ -0.25
TCRAP04437 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TCRAP04437 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TCRAP04437 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TCRAP04437 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TCRAP04437 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TCRAP04437 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TCRAP04437 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 SLC25A1P2-201ENST00000430693 912 ntBASIC13.48□□□□□ -0.25
TCRAP04437 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 AC090192.1-201ENST00000517740 490 ntBASIC13.48□□□□□ -0.25
TCRAP04437 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.48□□□□□ -0.25
TCRAP04437 AL353719.1-201ENST00000566847 864 ntBASIC13.48□□□□□ -0.25
TCRAP04437 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TCRAP04437 AL023803.3-201ENST00000615559 522 ntBASIC13.48□□□□□ -0.25
TCRAP04437 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TCRAP04437 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms