Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNX4O95219 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNX4O95219 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.67■□□□□ 0.26
SNX4O95219 IGHGP-201ENST00000390555 1178 ntBASIC16.67■□□□□ 0.26
SNX4O95219 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 AC113404.2-201ENST00000507884 177 ntBASIC16.67■□□□□ 0.26
SNX4O95219 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.67■□□□□ 0.26
SNX4O95219 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.67■□□□□ 0.26
SNX4O95219 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNX4O95219 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.67■□□□□ 0.26
SNX4O95219 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.67■□□□□ 0.26
SNX4O95219 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNX4O95219 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 AD000864.1-201ENST00000624076 2295 ntBASIC16.67■□□□□ 0.26
SNX4O95219 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.67■□□□□ 0.26
SNX4O95219 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNX4O95219 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 Z83836.1-201ENST00000624605 1642 ntBASIC16.67■□□□□ 0.26
SNX4O95219 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SNX4O95219 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNX4O95219 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.66■□□□□ 0.26
SNX4O95219 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
SNX4O95219 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.66■□□□□ 0.26
SNX4O95219 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.66■□□□□ 0.26
SNX4O95219 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.66■□□□□ 0.26
SNX4O95219 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.66■□□□□ 0.26
SNX4O95219 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.66■□□□□ 0.26
SNX4O95219 AL390719.2-201ENST00000606993 987 ntBASIC16.66■□□□□ 0.26
SNX4O95219 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.66■□□□□ 0.26
SNX4O95219 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SNX4O95219 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SNX4O95219 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNX4O95219 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNX4O95219 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNX4O95219 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SNX4O95219 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX4O95219 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX4O95219 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 TSSC2-201ENST00000450217 709 ntBASIC16.65■□□□□ 0.26
SNX4O95219 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms