Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SRGAP3O43295 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.97■■□□□ 1.11
SRGAP3O43295 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
SRGAP3O43295 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SRGAP3O43295 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
SRGAP3O43295 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.97■■□□□ 1.11
SRGAP3O43295 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SRGAP3O43295 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SRGAP3O43295 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SRGAP3O43295 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
SRGAP3O43295 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SRGAP3O43295 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SRGAP3O43295 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SRGAP3O43295 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SRGAP3O43295 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SRGAP3O43295 ABCD1P5-201ENST00000445663 754 ntBASIC21.96■■□□□ 1.11
SRGAP3O43295 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SRGAP3O43295 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.96■■□□□ 1.11
SRGAP3O43295 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.96■■□□□ 1.11
SRGAP3O43295 AD001527.2-201ENST00000622994 785 ntBASIC21.96■■□□□ 1.11
SRGAP3O43295 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.96■■□□□ 1.11
SRGAP3O43295 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SRGAP3O43295 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SRGAP3O43295 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SRGAP3O43295 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SRGAP3O43295 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SRGAP3O43295 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.95■■□□□ 1.1
SRGAP3O43295 SAPCD2P3-201ENST00000455031 850 ntBASIC21.95■■□□□ 1.1
SRGAP3O43295 AF238378.1-201ENST00000526806 358 ntBASIC21.95■■□□□ 1.1
SRGAP3O43295 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.95■■□□□ 1.1
SRGAP3O43295 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.95■■□□□ 1.1
SRGAP3O43295 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.95■■□□□ 1.1
SRGAP3O43295 AL121894.2-201ENST00000602977 491 ntBASIC21.95■■□□□ 1.1
SRGAP3O43295 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SRGAP3O43295 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 KRT8P10-201ENST00000450021 1447 ntBASIC21.95■■□□□ 1.1
SRGAP3O43295 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SRGAP3O43295 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SRGAP3O43295 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SRGAP3O43295 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.94■■□□□ 1.1
SRGAP3O43295 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.94■■□□□ 1.1
SRGAP3O43295 AC106795.1-205ENST00000512851 1056 ntBASIC21.94■■□□□ 1.1
SRGAP3O43295 AC109462.3-201ENST00000573934 613 ntBASIC21.94■■□□□ 1.1
SRGAP3O43295 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.94■■□□□ 1.1
SRGAP3O43295 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.94■■□□□ 1.1
SRGAP3O43295 AP000867.4-201ENST00000641616 219 ntBASIC21.94■■□□□ 1.1
SRGAP3O43295 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.94■■□□□ 1.1
SRGAP3O43295 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.94■■□□□ 1.1
SRGAP3O43295 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.94■■□□□ 1.1
SRGAP3O43295 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
SRGAP3O43295 LINC00304-203ENST00000565008 1864 ntBASIC21.94■■□□□ 1.1
SRGAP3O43295 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.94■■□□□ 1.1
SRGAP3O43295 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.94■■□□□ 1.1
SRGAP3O43295 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
SRGAP3O43295 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SRGAP3O43295 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.93■■□□□ 1.1
SRGAP3O43295 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.93■■□□□ 1.1
SRGAP3O43295 AC005104.2-201ENST00000427818 678 ntBASIC21.93■■□□□ 1.1
SRGAP3O43295 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.93■■□□□ 1.1
SRGAP3O43295 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.93■■□□□ 1.1
SRGAP3O43295 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.93■■□□□ 1.1
SRGAP3O43295 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.93■■□□□ 1.1
SRGAP3O43295 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.93■■□□□ 1.1
SRGAP3O43295 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 AP005117.1-201ENST00000584346 1413 ntBASIC21.93■■□□□ 1.1
SRGAP3O43295 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.93■■□□□ 1.1
SRGAP3O43295 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SRGAP3O43295 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SRGAP3O43295 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
SRGAP3O43295 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms