Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CUX2O14529 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CUX2O14529 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CUX2O14529 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC29.99■■■□□ 2.39
CUX2O14529 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC29.99■■■□□ 2.39
CUX2O14529 TMEM261P1-201ENST00000604899 340 ntBASIC29.99■■■□□ 2.39
CUX2O14529 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
CUX2O14529 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CUX2O14529 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
CUX2O14529 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CUX2O14529 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CUX2O14529 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC29.98■■■□□ 2.39
CUX2O14529 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC29.98■■■□□ 2.39
CUX2O14529 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
CUX2O14529 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
CUX2O14529 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CUX2O14529 MIR6787-201ENST00000616675 61 ntBASIC29.98■■■□□ 2.39
CUX2O14529 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CUX2O14529 AC084121.4-201ENST00000641598 221 ntBASIC29.98■■■□□ 2.39
CUX2O14529 AF228730.8-201ENST00000642140 221 ntBASIC29.98■■■□□ 2.39
CUX2O14529 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC29.97■■■□□ 2.39
CUX2O14529 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CUX2O14529 AC022144.1-201ENST00000602255 1580 ntBASIC29.97■■■□□ 2.39
CUX2O14529 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC29.97■■■□□ 2.39
CUX2O14529 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC29.97■■■□□ 2.39
CUX2O14529 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CUX2O14529 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
CUX2O14529 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CUX2O14529 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CUX2O14529 KLF4P1-201ENST00000412782 1185 ntBASIC29.97■■■□□ 2.39
CUX2O14529 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC29.97■■■□□ 2.39
CUX2O14529 AC119751.2-201ENST00000504529 210 ntBASIC29.97■■■□□ 2.39
CUX2O14529 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC29.97■■■□□ 2.39
CUX2O14529 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC29.97■■■□□ 2.39
CUX2O14529 CYB561-216ENST00000582297 897 ntTSL 3 BASIC29.97■■■□□ 2.39
CUX2O14529 SSH2-211ENST00000590153 570 ntTSL 4 BASIC29.97■■■□□ 2.39
CUX2O14529 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CUX2O14529 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC29.97■■■□□ 2.39
CUX2O14529 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
CUX2O14529 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
CUX2O14529 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC29.96■■■□□ 2.39
CUX2O14529 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 RPF1-202ENST00000370656 724 ntTSL 2 BASIC29.96■■■□□ 2.39
CUX2O14529 ELK2AP-201ENST00000392510 1007 ntBASIC29.96■■■□□ 2.39
CUX2O14529 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC29.96■■■□□ 2.39
CUX2O14529 INE1-201ENST00000456273 945 ntBASIC29.96■■■□□ 2.39
CUX2O14529 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
CUX2O14529 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC29.96■■■□□ 2.39
CUX2O14529 SSH2-210ENST00000582084 560 ntTSL 3 BASIC29.96■■■□□ 2.39
CUX2O14529 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC29.96■■■□□ 2.39
CUX2O14529 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
CUX2O14529 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC29.96■■■□□ 2.39
CUX2O14529 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC29.96■■■□□ 2.39
CUX2O14529 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC29.96■■■□□ 2.39
CUX2O14529 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CUX2O14529 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC29.96■■■□□ 2.39
CUX2O14529 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC29.95■■■□□ 2.39
CUX2O14529 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CUX2O14529 AC132938.5-201ENST00000624980 1813 ntBASIC29.95■■■□□ 2.39
CUX2O14529 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CUX2O14529 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC29.95■■■□□ 2.39
CUX2O14529 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
CUX2O14529 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC29.95■■■□□ 2.39
CUX2O14529 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CUX2O14529 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC29.95■■■□□ 2.39
CUX2O14529 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC29.95■■■□□ 2.39
CUX2O14529 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CUX2O14529 ARL16-202ENST00000570561 768 ntTSL 2 BASIC29.95■■■□□ 2.39
CUX2O14529 ACTL9-202ENST00000612068 1252 ntBASIC29.95■■■□□ 2.39
CUX2O14529 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CUX2O14529 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC29.95■■■□□ 2.38
CUX2O14529 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CUX2O14529 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC29.95■■■□□ 2.38
CUX2O14529 AC100757.3-201ENST00000622361 1406 ntBASIC29.95■■■□□ 2.38
CUX2O14529 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
CUX2O14529 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CUX2O14529 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CUX2O14529 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC29.94■■■□□ 2.38
CUX2O14529 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
CUX2O14529 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CUX2O14529 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC29.94■■■□□ 2.38
CUX2O14529 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
CUX2O14529 MIR6080-201ENST00000617359 66 ntBASIC29.94■■■□□ 2.38
CUX2O14529 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
CUX2O14529 USP39-202ENST00000409025 1946 ntTSL 5 BASIC29.94■■■□□ 2.38
CUX2O14529 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC29.94■■■□□ 2.38
CUX2O14529 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC29.94■■■□□ 2.38
CUX2O14529 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC29.93■■■□□ 2.38
CUX2O14529 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CUX2O14529 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC29.93■■■□□ 2.38
CUX2O14529 AC140658.5-201ENST00000438532 169 ntBASIC29.93■■■□□ 2.38
CUX2O14529 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms