Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC01548A6NM66 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01548A6NM66 AC134043.2-201ENST00000624206 2238 ntBASIC13.98□□□□□ -0.17
LINC01548A6NM66 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AKR1C7P-201ENST00000305623 895 ntBASIC13.97□□□□□ -0.17
LINC01548A6NM66 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 FAM220CP-201ENST00000395253 831 ntBASIC13.97□□□□□ -0.17
LINC01548A6NM66 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AL691432.3-201ENST00000621860 400 ntBASIC13.97□□□□□ -0.17
LINC01548A6NM66 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01548A6NM66 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01548A6NM66 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 REXO1L11P-201ENST00000620964 1927 ntBASIC13.96□□□□□ -0.17
LINC01548A6NM66 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 AC111152.3-201ENST00000569699 673 ntBASIC13.96□□□□□ -0.17
LINC01548A6NM66 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01548A6NM66 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01548A6NM66 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC01548A6NM66 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC01548A6NM66 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC01548A6NM66 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01548A6NM66 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01548A6NM66 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01548A6NM66 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01548A6NM66 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01548A6NM66 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
LINC01548A6NM66 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms