Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 NEFHP1-201ENST00000412845 2629 ntBASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 INTS4P1-201ENST00000438455 1935 ntBASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC007967.3-201ENST00000434308 558 ntBASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC079781.3-201ENST00000449110 356 ntBASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC116407.2-201ENST00000613639 860 ntBASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AL031008.1-201ENST00000619963 541 ntBASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.8□□□□□ -0.36
IGHV4-28A0A0C4DH34 AP000997.3-201ENST00000623333 2250 ntBASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC100803.2-201ENST00000562459 1963 ntBASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC097374.2-201ENST00000618617 1306 ntBASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.79□□□□□ -0.36
IGHV4-28A0A0C4DH34 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms