Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NAPSB-206ENST00000562112 1266 ntBASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC010947.1-201ENST00000623454 693 ntBASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-7A0A0A0MS04 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 HMGA1P5-201ENST00000412453 271 ntBASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 FAM87A-204ENST00000613235 858 ntBASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRBV6-7A0A0A0MS04 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRBV6-7A0A0A0MS04 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 AP000523.1-201ENST00000398242 1049 ntBASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 LINC01451-201ENST00000623792 534 ntBASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 AP006294.2-201ENST00000641667 209 ntBASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 FLJ38576-201ENST00000623820 2459 ntBASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 KRT8P9-201ENST00000558927 1449 ntBASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRBV6-7A0A0A0MS04 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
TRBV6-7A0A0A0MS04 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms