Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.47■■□□□ 1.03
ARFGEF1Q9Y6D6 AC005082.1-201ENST00000413042 2259 ntBASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 AC140658.5-201ENST00000438532 169 ntBASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARFGEF1Q9Y6D6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 COX5BP2-201ENST00000392354 334 ntBASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 AC109462.3-201ENST00000573934 613 ntBASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 MIR6752-201ENST00000618442 71 ntBASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 AC025048.6-201ENST00000634326 1161 ntBASIC21.45■■□□□ 1.03
ARFGEF1Q9Y6D6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 BASP1P1-201ENST00000430708 665 ntBASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 SPDYE22P-201ENST00000582158 798 ntBASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARFGEF1Q9Y6D6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 RN7SL692P-201ENST00000464677 288 ntBASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.44■■□□□ 1.02
ARFGEF1Q9Y6D6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 TREML5P-201ENST00000421694 576 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 FAM58DP-201ENST00000428076 619 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 INGX-202ENST00000489074 768 ntBASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.43■■□□□ 1.02
ARFGEF1Q9Y6D6 ACTL9-202ENST00000612068 1252 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms