Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 AF186996.4-201ENST00000467186 377 ntBASIC17.66■□□□□ 0.42
SPASTQ9UBP0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 HLA-A-201ENST00000376802 1334 ntBASIC17.66■□□□□ 0.42
SPASTQ9UBP0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
SPASTQ9UBP0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 AL133373.2-201ENST00000623187 2828 ntBASIC17.65■□□□□ 0.42
SPASTQ9UBP0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 AP001005.1-201ENST00000571755 1248 ntBASIC17.65■□□□□ 0.42
SPASTQ9UBP0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 AL138831.2-201ENST00000606564 490 ntBASIC17.65■□□□□ 0.42
SPASTQ9UBP0 AL773604.1-201ENST00000617417 272 ntBASIC17.65■□□□□ 0.42
SPASTQ9UBP0 TP73-AS1-207ENST00000624167 988 ntBASIC17.65■□□□□ 0.42
SPASTQ9UBP0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 PCDHB18P-201ENST00000524813 2368 ntBASIC17.65■□□□□ 0.42
SPASTQ9UBP0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPASTQ9UBP0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPASTQ9UBP0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.64■□□□□ 0.42
SPASTQ9UBP0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SPASTQ9UBP0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.64■□□□□ 0.41
SPASTQ9UBP0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 AC125634.1-201ENST00000438758 1403 ntBASIC17.64■□□□□ 0.41
SPASTQ9UBP0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
SPASTQ9UBP0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPASTQ9UBP0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.63■□□□□ 0.41
SPASTQ9UBP0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
SPASTQ9UBP0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.63■□□□□ 0.41
SPASTQ9UBP0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPASTQ9UBP0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPASTQ9UBP0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.63■□□□□ 0.41
SPASTQ9UBP0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms