Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMG20BQ9P0W2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 KRT18P67-201ENST00000432816 1264 ntBASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 SART3-203ENST00000546611 1184 ntBASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
HMG20BQ9P0W2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 AC009949.1-201ENST00000623048 1830 ntBASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 AC018712.1-201ENST00000455767 687 ntBASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMG20BQ9P0W2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 GNAS-203ENST00000306120 1878 ntBASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 AP000347.1-202ENST00000435868 847 ntBASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 RNPS1P1-201ENST00000507437 918 ntBASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 AD001527.2-201ENST00000622994 785 ntBASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HMG20BQ9P0W2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms