Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 FSCN1P1-201ENST00000568912 1481 ntBASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 AC128688.1-201ENST00000487626 519 ntBASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 AC130371.2-201ENST00000619443 611 ntBASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 AC100803.2-201ENST00000562459 1963 ntBASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.89■□□□□ 0.29
CCM2LQ9NUG4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 TSPY14P-201ENST00000303979 915 ntBASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 CRYGFP-201ENST00000418459 633 ntBASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCM2LQ9NUG4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 FAM207BP-201ENST00000447172 505 ntBASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 PCDHA14-201ENST00000506751 2298 ntBASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.87■□□□□ 0.29
CCM2LQ9NUG4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms