Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TLR9Q9NR96 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TLR9Q9NR96 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 AC003669.1-201ENST00000334569 611 ntBASIC18.72■□□□□ 0.59
TLR9Q9NR96 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 SIGLEC30P-201ENST00000455569 941 ntBASIC18.72■□□□□ 0.59
TLR9Q9NR96 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 AC092364.2-202ENST00000597012 1073 ntBASIC18.72■□□□□ 0.59
TLR9Q9NR96 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 ELL2P1-201ENST00000413990 1906 ntBASIC18.72■□□□□ 0.59
TLR9Q9NR96 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TLR9Q9NR96 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TLR9Q9NR96 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.71■□□□□ 0.59
TLR9Q9NR96 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.71■□□□□ 0.59
TLR9Q9NR96 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.71■□□□□ 0.59
TLR9Q9NR96 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TLR9Q9NR96 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.71■□□□□ 0.59
TLR9Q9NR96 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.71■□□□□ 0.59
TLR9Q9NR96 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.71■□□□□ 0.59
TLR9Q9NR96 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.71■□□□□ 0.59
TLR9Q9NR96 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 AC126763.1-201ENST00000552015 2118 ntBASIC18.71■□□□□ 0.59
TLR9Q9NR96 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TLR9Q9NR96 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.71■□□□□ 0.58
TLR9Q9NR96 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
TLR9Q9NR96 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 AL645939.2-201ENST00000427340 991 ntBASIC18.7■□□□□ 0.58
TLR9Q9NR96 CEND1P1-201ENST00000451006 455 ntBASIC18.7■□□□□ 0.58
TLR9Q9NR96 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 AP002472.1-201ENST00000577490 586 ntBASIC18.7■□□□□ 0.58
TLR9Q9NR96 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TLR9Q9NR96 AC010654.1-201ENST00000615722 808 ntBASIC18.7■□□□□ 0.58
TLR9Q9NR96 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TLR9Q9NR96 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms