Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 AC011676.5-201ENST00000624864 2660 ntBASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 MST1L-201ENST00000442552 2185 ntBASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLK4Q9HAZ1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 AL391005.1-201ENST00000623953 2435 ntBASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 FAM86EP-206ENST00000510506 987 ntBASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 AC091076.1-201ENST00000610741 619 ntBASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLK4Q9HAZ1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 AC018695.7-201ENST00000624587 2492 ntBASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 AC093677.2-201ENST00000600169 1863 ntBASIC17.27■□□□□ 0.35
CLK4Q9HAZ1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 AL118508.1-201ENST00000613502 2345 ntBASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 AC022211.2-201ENST00000585075 2527 ntBASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLK4Q9HAZ1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms