Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 HLA-J-201ENST00000462773 1622 ntBASIC17.86■□□□□ 0.45
VPS11Q9H270 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VPS11Q9H270 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS11Q9H270 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VPS11Q9H270 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VPS11Q9H270 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 KRT17P2-201ENST00000300992 1314 ntBASIC17.85■□□□□ 0.45
VPS11Q9H270 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
VPS11Q9H270 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS11Q9H270 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
VPS11Q9H270 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS11Q9H270 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS11Q9H270 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS11Q9H270 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS11Q9H270 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS11Q9H270 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS11Q9H270 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS11Q9H270 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
VPS11Q9H270 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS11Q9H270 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 CYP2D8P-201ENST00000433633 1490 ntBASIC17.84■□□□□ 0.45
VPS11Q9H270 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.84■□□□□ 0.45
VPS11Q9H270 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.84■□□□□ 0.45
VPS11Q9H270 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
VPS11Q9H270 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS11Q9H270 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS11Q9H270 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS11Q9H270 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS11Q9H270 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS11Q9H270 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.83■□□□□ 0.45
VPS11Q9H270 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS11Q9H270 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
VPS11Q9H270 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS11Q9H270 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VPS11Q9H270 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS11Q9H270 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
VPS11Q9H270 LINC00167-201ENST00000530583 1419 ntBASIC17.83■□□□□ 0.45
VPS11Q9H270 KRT8P9-201ENST00000558927 1449 ntBASIC17.83■□□□□ 0.45
VPS11Q9H270 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS11Q9H270 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.83■□□□□ 0.45
VPS11Q9H270 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VPS11Q9H270 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS11Q9H270 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.83■□□□□ 0.44
VPS11Q9H270 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.83■□□□□ 0.44
VPS11Q9H270 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VPS11Q9H270 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VPS11Q9H270 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.83■□□□□ 0.44
VPS11Q9H270 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS11Q9H270 MIR3917-201ENST00000580971 93 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms