Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP1Q9BWH6 AC093909.1-201ENST00000504731 1122 ntBASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 AC022898.2-201ENST00000616822 1312 ntBASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RPAP1Q9BWH6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 AC106730.1-201ENST00000566722 1090 ntBASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 AC139887.3-201ENST00000568585 713 ntBASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 FAM215A-202ENST00000632077 792 ntBASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 AC125634.1-201ENST00000438758 1403 ntBASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 AC112698.1-201ENST00000510299 916 ntBASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 AL049840.3-201ENST00000602669 611 ntBASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.48■■□□□ 1.03
RPAP1Q9BWH6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 AC100803.2-201ENST00000562459 1963 ntBASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPAP1Q9BWH6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPAP1Q9BWH6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms