Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF4Q9BUZ4 AL391807.1-203ENST00000604392 2365 ntBASIC15.9■□□□□ 0.14
TRAF4Q9BUZ4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF4Q9BUZ4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRAF4Q9BUZ4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AC016734.2-201ENST00000624325 1377 ntBASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 FEM1AP3-201ENST00000403722 1741 ntBASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AC092329.2-201ENST00000598402 547 ntBASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AL691432.3-201ENST00000621860 400 ntBASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AL023806.1-201ENST00000603994 1649 ntBASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 AC103702.1-201ENST00000548801 2630 ntBASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF4Q9BUZ4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 MIR662-201ENST00000384847 95 ntBASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 KRT8P26-201ENST00000534154 1276 ntBASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 AC104390.1-201ENST00000555663 520 ntBASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAF4Q9BUZ4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF4Q9BUZ4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms