Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TSPY15P-201ENST00000457163 923 ntBASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC099398.1-201ENST00000567919 2776 ntBASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHANK2-AS3Q9BTD1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC141257.4-201ENST00000634557 245 ntBASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 AC136944.6-201ENST00000634818 245 ntBASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 TMEM191A-211ENST00000637163 1067 ntBASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SHANK2-AS3Q9BTD1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 BX276092.7-203ENST00000637198 1536 ntBASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 LINC01568-207ENST00000641790 1380 ntBASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHANK2-AS3Q9BTD1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms