Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YIPF4Q9BSR8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 TSPY12P-201ENST00000421279 868 ntBASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 AC009949.1-201ENST00000623048 1830 ntBASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
YIPF4Q9BSR8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 MIR662-201ENST00000384847 95 ntBASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 IGHGP-201ENST00000390555 1178 ntBASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 KRT18P65-201ENST00000439811 1286 ntBASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 PP12613-201ENST00000424958 2230 ntBASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YIPF4Q9BSR8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
YIPF4Q9BSR8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
YIPF4Q9BSR8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
YIPF4Q9BSR8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
YIPF4Q9BSR8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 KRT8P47-201ENST00000604727 1398 ntBASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 AL031133.1-201ENST00000406807 723 ntBASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 AC012313.1-201ENST00000593393 3059 ntBASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YIPF4Q9BSR8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms