Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15□□□□□ -0.01
HDHD3Q9BSH5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15□□□□□ -0.01
HDHD3Q9BSH5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 PVRIG2P-201ENST00000435460 978 ntBASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 AC128688.1-201ENST00000487626 519 ntBASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.99□□□□□ -0.01
HDHD3Q9BSH5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 KRT8P47-201ENST00000604727 1398 ntBASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 NAPSB-206ENST00000562112 1266 ntBASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 AC008687.5-201ENST00000593746 558 ntBASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDHD3Q9BSH5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 KRT17P2-201ENST00000300992 1314 ntBASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 AC116407.2-201ENST00000613639 860 ntBASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDHD3Q9BSH5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms