Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
EBF4Q9BQW3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 LYSMD4-203ENST00000378904 2122 ntBASIC17.28■□□□□ 0.36
EBF4Q9BQW3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 AP005242.2-201ENST00000580065 1175 ntBASIC17.28■□□□□ 0.36
EBF4Q9BQW3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 MIR4651-201ENST00000582622 73 ntBASIC17.28■□□□□ 0.36
EBF4Q9BQW3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 AC116407.2-201ENST00000613639 860 ntBASIC17.28■□□□□ 0.36
EBF4Q9BQW3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 AL135905.2-201ENST00000584934 1404 ntBASIC17.28■□□□□ 0.36
EBF4Q9BQW3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EBF4Q9BQW3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.27■□□□□ 0.36
EBF4Q9BQW3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 ID1-201ENST00000376105 1233 ntBASIC17.27■□□□□ 0.36
EBF4Q9BQW3 KRT18P29-201ENST00000397031 1267 ntBASIC17.27■□□□□ 0.36
EBF4Q9BQW3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 TSPY17P-201ENST00000450329 467 ntBASIC17.27■□□□□ 0.36
EBF4Q9BQW3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.27■□□□□ 0.36
EBF4Q9BQW3 LINC02199-201ENST00000506655 2702 ntBASIC17.27■□□□□ 0.36
EBF4Q9BQW3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EBF4Q9BQW3 AC092338.2-201ENST00000568827 1415 ntBASIC17.27■□□□□ 0.35
EBF4Q9BQW3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EBF4Q9BQW3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EBF4Q9BQW3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
EBF4Q9BQW3 KRT8P47-201ENST00000604727 1398 ntBASIC17.27■□□□□ 0.35
EBF4Q9BQW3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 PKD1P1-201ENST00000458669 6805 ntBASIC17.26■□□□□ 0.35
EBF4Q9BQW3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.26■□□□□ 0.35
EBF4Q9BQW3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.26■□□□□ 0.35
EBF4Q9BQW3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 SEC1P-202ENST00000473944 940 ntBASIC17.26■□□□□ 0.35
EBF4Q9BQW3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EBF4Q9BQW3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms