Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 AC073111.5-205ENST00000641717 521 ntBASIC16.71■□□□□ 0.27
NR1H4Q96RI1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NR1H4Q96RI1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR1H4Q96RI1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR1H4Q96RI1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR1H4Q96RI1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR1H4Q96RI1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NR1H4Q96RI1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 AP000593.1-201ENST00000393668 712 ntBASIC16.7■□□□□ 0.26
NR1H4Q96RI1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 AC073210.2-201ENST00000430369 194 ntBASIC16.7■□□□□ 0.26
NR1H4Q96RI1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 AL137784.2-201ENST00000607332 1000 ntBASIC16.7■□□□□ 0.26
NR1H4Q96RI1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.7■□□□□ 0.26
NR1H4Q96RI1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.69■□□□□ 0.26
NR1H4Q96RI1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 AC133552.2-202ENST00000575694 574 ntBASIC16.69■□□□□ 0.26
NR1H4Q96RI1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NR1H4Q96RI1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NR1H4Q96RI1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms