Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 AC027307.3-201ENST00000594262 1100 ntBASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSMD1Q96PZ7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AC010460.3-201ENST00000511359 1579 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AC003669.1-201ENST00000334569 611 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 TUBB3P1-201ENST00000405796 1332 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AC093503.3-201ENST00000624917 2352 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AL627223.1-201ENST00000416693 442 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AC096734.2-201ENST00000562054 433 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 AC004790.2-201ENST00000623588 572 ntBASIC14.98□□□□□ -0.01
CSMD1Q96PZ7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 RPS2P32-201ENST00000439199 892 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 CNN2P2-201ENST00000443536 909 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 MTCL1P1-201ENST00000446207 792 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 CNN2P3-201ENST00000450201 906 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 AC074386.1-202ENST00000463561 864 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 AL136317.3-201ENST00000618497 906 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 MIR1909-201ENST00000411312 80 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 SPTSSB-204ENST00000617024 1292 ntBASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CSMD1Q96PZ7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.96□□□□□ -0.01
CSMD1Q96PZ7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms