Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 AL121672.3-201ENST00000608644 468 ntBASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 AL139327.4-201ENST00000612362 153 ntBASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PDLIM5Q96HC4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 CHCHD2P8-201ENST00000429873 447 ntBASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 BX276092.5-203ENST00000456199 560 ntBASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC005336.2-201ENST00000593183 939 ntBASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AL590326.2-201ENST00000625139 305 ntBASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.3■□□□□ 0.36
PDLIM5Q96HC4 AC016734.2-201ENST00000624325 1377 ntBASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDLIM5Q96HC4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 MYCLP1-201ENST00000372451 1075 ntBASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 AC103564.2-201ENST00000432853 1299 ntBASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 AC019129.2-201ENST00000609837 1235 ntBASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDLIM5Q96HC4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms