Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC44A1Q8WWI5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC44A1Q8WWI5 BX276092.7-203ENST00000637198 1536 ntBASIC17.77■□□□□ 0.43
SLC44A1Q8WWI5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC44A1Q8WWI5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC44A1Q8WWI5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC44A1Q8WWI5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC44A1Q8WWI5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 AC060834.1-201ENST00000443027 2032 ntBASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 TSPY15P-201ENST00000457163 923 ntBASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC44A1Q8WWI5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 AC116353.5-201ENST00000638148 1699 ntBASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC44A1Q8WWI5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 LINC01311-201ENST00000565162 1445 ntBASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
SLC44A1Q8WWI5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms