Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PGBD3Q8N328 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.99■□□□□ 0.47
PGBD3Q8N328 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.99■□□□□ 0.47
PGBD3Q8N328 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PGBD3Q8N328 AC012640.2-201ENST00000561606 901 ntBASIC17.99■□□□□ 0.47
PGBD3Q8N328 AC145285.3-201ENST00000564603 959 ntBASIC17.99■□□□□ 0.47
PGBD3Q8N328 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.99■□□□□ 0.47
PGBD3Q8N328 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.99■□□□□ 0.47
PGBD3Q8N328 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.99■□□□□ 0.47
PGBD3Q8N328 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 AL390961.4-201ENST00000623958 2535 ntBASIC17.99■□□□□ 0.47
PGBD3Q8N328 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 BICD1-207ENST00000551848 1962 ntBASIC17.99■□□□□ 0.47
PGBD3Q8N328 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD3Q8N328 LETM1P2-201ENST00000597330 2178 ntBASIC17.98■□□□□ 0.47
PGBD3Q8N328 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 ANO7L1-203ENST00000602586 1720 ntBASIC17.98■□□□□ 0.47
PGBD3Q8N328 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.98■□□□□ 0.47
PGBD3Q8N328 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.98■□□□□ 0.47
PGBD3Q8N328 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.98■□□□□ 0.47
PGBD3Q8N328 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.98■□□□□ 0.47
PGBD3Q8N328 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.98■□□□□ 0.47
PGBD3Q8N328 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 RNA5SP415-201ENST00000517246 115 ntBASIC17.98■□□□□ 0.47
PGBD3Q8N328 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.98■□□□□ 0.47
PGBD3Q8N328 AC105339.3-201ENST00000560043 636 ntBASIC17.98■□□□□ 0.47
PGBD3Q8N328 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 AC025062.2-201ENST00000605477 670 ntBASIC17.98■□□□□ 0.47
PGBD3Q8N328 Z83851.2-201ENST00000609564 659 ntBASIC17.98■□□□□ 0.47
PGBD3Q8N328 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.98■□□□□ 0.47
PGBD3Q8N328 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD3Q8N328 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD3Q8N328 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD3Q8N328 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD3Q8N328 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD3Q8N328 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 FAM197Y3-203ENST00000618346 717 ntBASIC17.97■□□□□ 0.47
PGBD3Q8N328 AL691403.2-201ENST00000618460 490 ntBASIC17.97■□□□□ 0.47
PGBD3Q8N328 AC008735.5-201ENST00000623544 497 ntBASIC17.97■□□□□ 0.47
PGBD3Q8N328 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD3Q8N328 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD3Q8N328 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD3Q8N328 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PGBD3Q8N328 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.96■□□□□ 0.47
PGBD3Q8N328 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PGBD3Q8N328 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PGBD3Q8N328 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.96■□□□□ 0.47
PGBD3Q8N328 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.96■□□□□ 0.47
PGBD3Q8N328 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PGBD3Q8N328 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD3Q8N328 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms