Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 AC009093.7-201ENST00000623853 1223 ntBASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT28Q7Z3Y7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 BX276092.7-203ENST00000637198 1536 ntBASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AL513480.1-201ENST00000451731 511 ntBASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 TIMM8BP1-201ENST00000452384 211 ntBASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 NMU-203ENST00000507338 658 ntTSL 3 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AC093214.1-201ENST00000511688 1107 ntBASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AC112191.1-201ENST00000523689 701 ntBASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 ACTL9-202ENST00000612068 1252 ntBASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.79■■□□□ 1.4
KRT28Q7Z3Y7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 AIRN-201ENST00000601203 4374 ntBASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
KRT28Q7Z3Y7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 COPE-202ENST00000349893 948 ntTSL 2 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 AL035252.4-201ENST00000624174 288 ntBASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 AL031598.1-201ENST00000561511 1773 ntBASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.77■■□□□ 1.4
KRT28Q7Z3Y7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 PMS2P4-201ENST00000412466 1052 ntBASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 AC067863.1-201ENST00000494933 530 ntBASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KRT28Q7Z3Y7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms