Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 REXO1L9P-201ENST00000604264 2108 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 LINC01126-201ENST00000623515 1646 ntBASIC16.65■□□□□ 0.26
RTL4Q6ZR62 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTL4Q6ZR62 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.64■□□□□ 0.26
RTL4Q6ZR62 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RTL4Q6ZR62 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RTL4Q6ZR62 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RTL4Q6ZR62 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 RN7SL606P-201ENST00000472779 293 ntBASIC16.64■□□□□ 0.25
RTL4Q6ZR62 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL4Q6ZR62 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 DUSP5P1-201ENST00000441325 1139 ntBASIC16.63■□□□□ 0.25
RTL4Q6ZR62 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 KRT126P-201ENST00000549467 1181 ntBASIC16.63■□□□□ 0.25
RTL4Q6ZR62 AC012615.1-201ENST00000565797 1299 ntBASIC16.63■□□□□ 0.25
RTL4Q6ZR62 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 AC011840.4-201ENST00000578471 627 ntBASIC16.63■□□□□ 0.25
RTL4Q6ZR62 Z69720.1-201ENST00000601483 472 ntBASIC16.63■□□□□ 0.25
RTL4Q6ZR62 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 FLJ13224-201ENST00000313737 1514 ntBASIC16.63■□□□□ 0.25
RTL4Q6ZR62 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL4Q6ZR62 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 AC104819.1-201ENST00000504587 486 ntBASIC16.62■□□□□ 0.25
RTL4Q6ZR62 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms