Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 ATP5G1P1-201ENST00000448724 379 ntBASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 WWOX-216ENST00000569818 525 ntBASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 LINC01023-201ENST00000606054 436 ntBASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 FAM87A-204ENST00000613235 858 ntBASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 CR769767.2-201ENST00000622735 460 ntBASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 ANO7L1-203ENST00000602586 1720 ntBASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM53Q6P2H8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 AC112777.1-201ENST00000540175 1423 ntBASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 AC034236.2-201ENST00000606662 1610 ntBASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM53Q6P2H8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 AC211429.1-201ENST00000415277 523 ntBASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 SLC25A3P1-201ENST00000443844 931 ntBASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 AC005363.2-201ENST00000618631 242 ntBASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM53Q6P2H8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms