Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 AL512356.2-201ENST00000546955 174 ntBASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 AC026120.1-201ENST00000611536 926 ntBASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RSPO4Q2I0M5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 AC093484.2-201ENST00000580996 2166 ntBASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 GPR53P-205ENST00000457298 1084 ntBASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 SPDYE22P-201ENST00000582158 798 ntBASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 AC092919.2-201ENST00000623631 1645 ntBASIC17.07■□□□□ 0.32
RSPO4Q2I0M5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 PTCHD3P3-201ENST00000403073 906 ntBASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 AC103564.2-201ENST00000432853 1299 ntBASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 ADH5P3-201ENST00000433842 1137 ntBASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 SLC25A6P5-201ENST00000435663 894 ntBASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RSPO4Q2I0M5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.05■□□□□ 0.32
RSPO4Q2I0M5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms