Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
HMGXB3Q12766 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HMGXB3Q12766 MYCLP1-201ENST00000372451 1075 ntBASIC30.86■■■□□ 2.53
HMGXB3Q12766 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC30.86■■■□□ 2.53
HMGXB3Q12766 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
HMGXB3Q12766 COQ9-214ENST00000567933 882 ntTSL 3 BASIC30.86■■■□□ 2.53
HMGXB3Q12766 AL358472.5-202ENST00000641448 1267 ntBASIC30.86■■■□□ 2.53
HMGXB3Q12766 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
HMGXB3Q12766 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC30.85■■■□□ 2.53
HMGXB3Q12766 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
HMGXB3Q12766 AC129492.6-201ENST00000611383 1305 ntBASIC30.85■■■□□ 2.53
HMGXB3Q12766 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HMGXB3Q12766 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
HMGXB3Q12766 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HMGXB3Q12766 AL671277.1-201ENST00000429656 993 ntBASIC30.85■■■□□ 2.53
HMGXB3Q12766 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC30.85■■■□□ 2.53
HMGXB3Q12766 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC30.85■■■□□ 2.53
HMGXB3Q12766 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC30.85■■■□□ 2.53
HMGXB3Q12766 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
HMGXB3Q12766 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 PPP6R2P1-201ENST00000450880 1275 ntBASIC30.84■■■□□ 2.53
HMGXB3Q12766 AC004890.2-204ENST00000481968 304 ntBASIC30.84■■■□□ 2.53
HMGXB3Q12766 SERBP1P5-201ENST00000510079 1181 ntBASIC30.84■■■□□ 2.53
HMGXB3Q12766 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC30.84■■■□□ 2.53
HMGXB3Q12766 AC026150.2-201ENST00000564693 1156 ntBASIC30.84■■■□□ 2.53
HMGXB3Q12766 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HMGXB3Q12766 AC008677.1-201ENST00000519230 1561 ntBASIC30.84■■■□□ 2.53
HMGXB3Q12766 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 RBPMS2P1-201ENST00000437762 623 ntBASIC30.83■■■□□ 2.53
HMGXB3Q12766 RN7SL692P-201ENST00000464677 288 ntBASIC30.83■■■□□ 2.53
HMGXB3Q12766 GATD1-206ENST00000526325 756 ntTSL 5 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 SRP9-204ENST00000619790 377 ntTSL 2 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
HMGXB3Q12766 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 AC069120.2-201ENST00000524091 540 ntBASIC30.83■■■□□ 2.53
HMGXB3Q12766 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC30.83■■■□□ 2.53
HMGXB3Q12766 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
HMGXB3Q12766 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC30.82■■■□□ 2.53
HMGXB3Q12766 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HMGXB3Q12766 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
HMGXB3Q12766 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
HMGXB3Q12766 FLYWCH1P1-201ENST00000460917 1874 ntBASIC30.82■■■□□ 2.52
HMGXB3Q12766 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HMGXB3Q12766 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC30.82■■■□□ 2.52
HMGXB3Q12766 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
HMGXB3Q12766 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC30.82■■■□□ 2.52
HMGXB3Q12766 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC30.81■■■□□ 2.52
HMGXB3Q12766 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 CD81-202ENST00000381036 880 ntTSL 3 BASIC30.81■■■□□ 2.52
HMGXB3Q12766 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC30.81■■■□□ 2.52
HMGXB3Q12766 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC30.81■■■□□ 2.52
HMGXB3Q12766 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
HMGXB3Q12766 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC30.81■■■□□ 2.52
HMGXB3Q12766 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
HMGXB3Q12766 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC30.8■■■□□ 2.52
HMGXB3Q12766 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
HMGXB3Q12766 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC30.8■■■□□ 2.52
HMGXB3Q12766 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
HMGXB3Q12766 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
HMGXB3Q12766 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
HMGXB3Q12766 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC30.8■■■□□ 2.52
HMGXB3Q12766 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 TDG-209ENST00000544861 1387 ntTSL 2 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 SPDYE7P-202ENST00000420373 878 ntBASIC30.79■■■□□ 2.52
HMGXB3Q12766 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms