Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.05■□□□□ 0.64
SMAD3P84022 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.05■□□□□ 0.64
SMAD3P84022 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.05■□□□□ 0.64
SMAD3P84022 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.05■□□□□ 0.64
SMAD3P84022 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.05■□□□□ 0.64
SMAD3P84022 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD3P84022 RN7SL204P-201ENST00000582831 262 ntBASIC19.05■□□□□ 0.64
SMAD3P84022 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD3P84022 AC023141.13-201ENST00000604991 943 ntBASIC19.05■□□□□ 0.64
SMAD3P84022 AL805961.1-202ENST00000641562 540 ntBASIC19.05■□□□□ 0.64
SMAD3P84022 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD3P84022 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD3P84022 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.05■□□□□ 0.64
SMAD3P84022 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD3P84022 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD3P84022 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMAD3P84022 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SMAD3P84022 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SMAD3P84022 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.04■□□□□ 0.64
SMAD3P84022 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.04■□□□□ 0.64
SMAD3P84022 AC096633.1-201ENST00000422446 749 ntBASIC19.04■□□□□ 0.64
SMAD3P84022 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.04■□□□□ 0.64
SMAD3P84022 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 MYLKP1-201ENST00000509077 1580 ntBASIC19.04■□□□□ 0.64
SMAD3P84022 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 AL499627.1-201ENST00000569373 2188 ntBASIC19.04■□□□□ 0.64
SMAD3P84022 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.04■□□□□ 0.64
SMAD3P84022 AL359881.2-201ENST00000602973 570 ntBASIC19.04■□□□□ 0.64
SMAD3P84022 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.04■□□□□ 0.64
SMAD3P84022 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SMAD3P84022 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SMAD3P84022 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMAD3P84022 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.03■□□□□ 0.64
SMAD3P84022 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 TFAMP1-201ENST00000412727 736 ntBASIC19.03■□□□□ 0.64
SMAD3P84022 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 TSPY16P-201ENST00000449843 468 ntBASIC19.03■□□□□ 0.64
SMAD3P84022 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.03■□□□□ 0.64
SMAD3P84022 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SMAD3P84022 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.03■□□□□ 0.64
SMAD3P84022 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.03■□□□□ 0.64
SMAD3P84022 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMAD3P84022 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
SMAD3P84022 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SMAD3P84022 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.02■□□□□ 0.64
SMAD3P84022 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMAD3P84022 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.02■□□□□ 0.64
SMAD3P84022 AC055876.3-201ENST00000431496 288 ntBASIC19.02■□□□□ 0.64
SMAD3P84022 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.02■□□□□ 0.64
SMAD3P84022 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMAD3P84022 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.02■□□□□ 0.64
SMAD3P84022 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.02■□□□□ 0.64
SMAD3P84022 AC138649.4-201ENST00000612222 287 ntBASIC19.02■□□□□ 0.64
SMAD3P84022 AC009093.7-201ENST00000623853 1223 ntBASIC19.02■□□□□ 0.64
SMAD3P84022 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMAD3P84022 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SMAD3P84022 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMAD3P84022 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms