Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CDH4P55283 AL121912.1-201ENST00000603683 238 ntBASIC18.11■□□□□ 0.49
CDH4P55283 AC019129.2-201ENST00000609837 1235 ntBASIC18.11■□□□□ 0.49
CDH4P55283 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH4P55283 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 AL353593.2-201ENST00000602529 1483 ntBASIC18.11■□□□□ 0.49
CDH4P55283 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH4P55283 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH4P55283 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDH4P55283 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH4P55283 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH4P55283 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH4P55283 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDH4P55283 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH4P55283 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CDH4P55283 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH4P55283 PMPCAP1-201ENST00000508114 1576 ntBASIC18.1■□□□□ 0.49
CDH4P55283 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
CDH4P55283 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH4P55283 AC005104.2-201ENST00000427818 678 ntBASIC18.1■□□□□ 0.49
CDH4P55283 AC002558.1-201ENST00000488906 803 ntBASIC18.1■□□□□ 0.49
CDH4P55283 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH4P55283 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.1■□□□□ 0.49
CDH4P55283 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH4P55283 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 MTDHP3-201ENST00000594186 672 ntBASIC18.1■□□□□ 0.49
CDH4P55283 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDH4P55283 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CDH4P55283 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH4P55283 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH4P55283 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 KRT8P10-201ENST00000450021 1447 ntBASIC18.09■□□□□ 0.49
CDH4P55283 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH4P55283 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CDH4P55283 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH4P55283 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CDH4P55283 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH4P55283 AC079781.3-201ENST00000449110 356 ntBASIC18.09■□□□□ 0.49
CDH4P55283 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CDH4P55283 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.09■□□□□ 0.49
CDH4P55283 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH4P55283 AC109462.3-201ENST00000573934 613 ntBASIC18.09■□□□□ 0.49
CDH4P55283 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDH4P55283 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH4P55283 AL031008.1-201ENST00000619963 541 ntBASIC18.09■□□□□ 0.49
CDH4P55283 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
CDH4P55283 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH4P55283 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH4P55283 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH4P55283 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH4P55283 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH4P55283 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDH4P55283 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH4P55283 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.08■□□□□ 0.49
CDH4P55283 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CDH4P55283 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CDH4P55283 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH4P55283 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH4P55283 FGFR3P6-201ENST00000457012 610 ntBASIC18.08■□□□□ 0.48
CDH4P55283 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH4P55283 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.08■□□□□ 0.48
CDH4P55283 IGHV3-52-201ENST00000519770 353 ntBASIC18.08■□□□□ 0.48
CDH4P55283 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CDH4P55283 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.08■□□□□ 0.48
CDH4P55283 AC104692.2-201ENST00000603054 253 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms