Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.66■□□□□ 0.74
BRCA2P51587 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
BRCA2P51587 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 AC067863.1-201ENST00000494933 530 ntBASIC19.66■□□□□ 0.74
BRCA2P51587 AC010336.2-201ENST00000564226 506 ntBASIC19.66■□□□□ 0.74
BRCA2P51587 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.66■□□□□ 0.74
BRCA2P51587 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 KLF4P1-201ENST00000412782 1185 ntBASIC19.66■□□□□ 0.74
BRCA2P51587 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.66■□□□□ 0.74
BRCA2P51587 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 MIR6799-201ENST00000620297 69 ntBASIC19.66■□□□□ 0.74
BRCA2P51587 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
BRCA2P51587 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BRCA2P51587 AC107890.1-201ENST00000422478 521 ntBASIC19.66■□□□□ 0.74
BRCA2P51587 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BRCA2P51587 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 CLDN5-201ENST00000403084 2357 ntBASIC19.65■□□□□ 0.74
BRCA2P51587 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.65■□□□□ 0.74
BRCA2P51587 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BRCA2P51587 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.65■□□□□ 0.74
BRCA2P51587 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.65■□□□□ 0.74
BRCA2P51587 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BRCA2P51587 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BRCA2P51587 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BRCA2P51587 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 KRT8P48-201ENST00000515599 1220 ntBASIC19.65■□□□□ 0.74
BRCA2P51587 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.65■□□□□ 0.74
BRCA2P51587 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.65■□□□□ 0.74
BRCA2P51587 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.65■□□□□ 0.74
BRCA2P51587 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.65■□□□□ 0.74
BRCA2P51587 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.65■□□□□ 0.74
BRCA2P51587 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BRCA2P51587 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.65■□□□□ 0.74
BRCA2P51587 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.65■□□□□ 0.74
BRCA2P51587 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BRCA2P51587 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRCA2P51587 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRCA2P51587 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
BRCA2P51587 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.64■□□□□ 0.74
BRCA2P51587 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.64■□□□□ 0.74
BRCA2P51587 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
BRCA2P51587 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BRCA2P51587 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BRCA2P51587 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.64■□□□□ 0.73
BRCA2P51587 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.64■□□□□ 0.73
BRCA2P51587 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.64■□□□□ 0.73
BRCA2P51587 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BRCA2P51587 AC116407.2-201ENST00000613639 860 ntBASIC19.64■□□□□ 0.73
BRCA2P51587 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.64■□□□□ 0.73
BRCA2P51587 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
BRCA2P51587 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
BRCA2P51587 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
BRCA2P51587 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.64■□□□□ 0.73
BRCA2P51587 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BRCA2P51587 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.63■□□□□ 0.73
BRCA2P51587 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 AL355306.1-201ENST00000415580 579 ntBASIC19.63■□□□□ 0.73
BRCA2P51587 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.63■□□□□ 0.73
BRCA2P51587 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BRCA2P51587 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms