Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A12P48065 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A12P48065 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 DRAXINP1-201ENST00000437611 948 ntBASIC17.09■□□□□ 0.33
SLC6A12P48065 AC122714.2-201ENST00000502787 707 ntBASIC17.09■□□□□ 0.33
SLC6A12P48065 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC6A12P48065 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A12P48065 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SLC6A12P48065 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC6A12P48065 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A12P48065 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC6A12P48065 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC6A12P48065 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 AC020916.1-201ENST00000587762 1774 ntBASIC17.09■□□□□ 0.33
SLC6A12P48065 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC6A12P48065 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SLC6A12P48065 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC6A12P48065 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC6A12P48065 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A12P48065 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A12P48065 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A12P48065 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A12P48065 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC6A12P48065 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC6A12P48065 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC6A12P48065 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SLC6A12P48065 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SLC6A12P48065 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC6A12P48065 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SLC6A12P48065 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A12P48065 KRT18P1-202ENST00000452408 1331 ntBASIC17.08■□□□□ 0.32
SLC6A12P48065 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC6A12P48065 TPSP2-201ENST00000561760 610 ntBASIC17.08■□□□□ 0.32
SLC6A12P48065 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A12P48065 AL139327.4-201ENST00000612362 153 ntBASIC17.08■□□□□ 0.32
SLC6A12P48065 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SLC6A12P48065 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC6A12P48065 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SLC6A12P48065 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC6A12P48065 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC6A12P48065 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SLC6A12P48065 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A12P48065 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLC6A12P48065 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC6A12P48065 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A12P48065 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC6A12P48065 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A12P48065 AC233702.3-201ENST00000578656 1387 ntBASIC17.07■□□□□ 0.32
SLC6A12P48065 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC6A12P48065 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC6A12P48065 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SLC6A12P48065 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A12P48065 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A12P48065 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 VENTXP7-201ENST00000475503 772 ntBASIC17.07■□□□□ 0.32
SLC6A12P48065 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC6A12P48065 AL445228.2-201ENST00000605589 952 ntBASIC17.07■□□□□ 0.32
SLC6A12P48065 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC6A12P48065 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC6A12P48065 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC6A12P48065 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC6A12P48065 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC6A12P48065 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC6A12P48065 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms